Search across plant genomics resources:

e.g. rubisco, carboxylate synthase, PAD4

transPLANT search

The transPLANT search combines results from seven different plant genomics databases across five different host institutes in a single click! Get in touch to integrate your resource!

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transPLANT variation archive

The transPLANT variation archive stores, accessions and updates plant variation data! We are now accepting submissions in VCF format on public reference sequences. Submit a VCF or browse the archive.


Meetings and Events

Announcing the 3rd transPLANT user training workshop, focused on the latest developments in the key plant data resources in Europe and how to use them. With a special reference to Solanaceae genomes, especially tomato and potato, the workshop will be held in Wageningen, the Netherlands on October 13-14, 2014.

transPLANT training resources

A collection of training resources from transPLANT related events.

Browse the materials.


–» Publication
NextClip: an analysis and read preparation tool for Nextera long mate pair libraries.
Leggett RM et al., et al., Bioinformatics, 2013


–» Publication
Gene Ontology consistent protein function prediction: the FALCON algorithm applied to six eukaryotic genomes.
Kourmpetis YA et al., et al., Algorithms Mol Biol, 2013
PubMed | DOI