Training videos

Video tutorials

transPLANT is developing a series of videos, guiding users through some of the most interesting and complex data sets available for plants. New videos will be posted here as they are produced. Watch the first one, focusing on tools and resources for the barley genome, now!


Barley resources from the transPLANT partners

Learn how to mine, integrate and interpret heterogenous barley genome data from various transPLANT resources and databases.


Wheat resources from the transPLANT partners

Learn how to mine, integrate and interpret polyploid wheat genome data from various transPLANT resources and databases.


transPLANT PMES tutorial

Step by step tutorial on how to launch a single application (tophat) on Transplant Cloud using PMES dashboard and Data Manager.


transPLANT COMPSs tutorial

Step by step tutorial on how to launch parallel COMPSs applications (REPET) on Transplant Cloud using PMES dashboard and Data Manager.


Learn how to find a gene and browse a region of the genome in the Ensembl genome browser

A video focused on the vertebrate Ensembl genome browser, but functionality is applicable to the Ensembl Plants genome browser. More Ensembl videos are available here.


Browse sequence variation for a gene in the Ensembl genome browser

A video focused on the vertebrate Ensembl genome browser, but functionality is applicable to the Ensembl Plants genome browser. More Ensembl videos are available here.


An introduction to BioMart

BioMart can be used to export data from Ensembl and Ensembl Genomes. Biologists and programmers alike can export information such as tables of gene IDs, gene positions, associated variations, and protein domains, or sequences. More Ensembl videos are available here.

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